swamp.wrappers.mtz2various module

class Mtz2Various(workdir, mtzin, hklout, logger=None, silent_start=False)[source]

Bases: swamp.wrappers.wrapper.Wrapper

Wrapper around mtz2various

Parameters:
  • workdir (str) – working directory
  • mtzin (str) – mtz file name
  • hklout (str) – hkl output file name
  • logger (SwampLogger) – logging interface for the wrapper (default None)
  • silent_start (bool) – if True, the logger will not display the start banner (default False)
Variables:

error (bool) – if True an error has occurred along the process
Example: 
>>> from swamp.wrappers import Mtz2Various
>>> my_mtz2various = Mtz2Various('<workdir>' '<mtzin>', '<hklout>')
>>> my_mtz2various.run()
>>> my_mtz2various.make_logfile()
cmd

Command to be executed on the shell

get_scores(logfile=None)[source]

Abstract method to get scores (not implemented in this class)

keywords

Keywords to pass to mtz2various through stdin

summary_results

No figures of merit are obtained with mtz2various

wrapper_name

The name of this ~swamp.wrapper.wrapper.Wrapper child class (mtz2various)