Clustering subpackage

SWAMP: Solving structures With Alpha Membrane Pairs

This module implements classes and methods to cluster the fragments present in the SWAMP library to form ensembles that can be used as search models.

Clustering(*args, **kwargs)

Clustering instance

Optics(*args, **kwargs)

Optics instance

Spectral(*args, **kwargs)

Spectral instance

SwampAffinityPropagation(*args, **kwargs)

SwampAffinityPropagation instance

• swamp.clustering.clustering module
• swamp.clustering.optics module
• swamp.clustering.spectral module
• swamp.clustering.swampaffinitypropagation module